基于SLAF-seq的天竺桂群体遗传变异分析

杨颖, 刘向东, 段豪, 芦治国

Genetic variation analysis of Cinnamomum japonicum populations based on SLAF-Seq technique

YANG Ying, LIU Xiangdong, DUAN Hao, LU Zhiguo

表1 30个样品的SNP信息统计

Table 1 SNP information statistics of 30 samples

样品编号 sample ID SNP个数 SNP number SNP 杂合率/% hetloci ratio SNP 完整度/% integrity ratio ZJ-LHZ-1 1 103 214 6.74 32.35 ZJ-LHZ-2 1 042 601 6.34 30.58 ZJ-LHZ-3 1 114 298 6.95 32.68 ZJ-LHZ-4 1 138 102 7.16 33.38 ZJ-LHZ-5 1 116 854 7.08 32.75 ZJ-LHZ-6 944 920 5.68 27.71 ZJ-TMS-3 1 320 574 7.48 38.73 ZJ-TMS-4 1 373 270 7.66 40.27 ZJ-TMS-5 1 211 864 8.43 35.54 AH-JX-1 1 368 810 8.17 40.14 AH-JX-2 917 896 6.25 26.92 AH-JX-3 1 004 978 6.44 29.47 AH-HS-1 1 352 623 8.98 39.67 AH-HS-2 1 259 826 8.52 36.95 AH-HS-3 1 386 854 8.30 40.67 AH-HS-4 1 367 363 9.07 40.10 AH-HS-5 1 345 653 8.91 39.46 HN-FNS-1 1 249 145 8.12 36.63 HN-FNS-2 1 337 990 8.44 39.24 HN-FNS-3 1 229 537 8.72 36.06 CQ-WZ-1 1 062 854 5.80 31.17 CQ-WZ-2 1 013 706 6.20 29.73 CQ-WZ-3 1 089 181 5.78 31.94 CQ-WZ-4 1 022 760 5.61 29.99 CQ-WZ-5 987 065 5.81 28.95 YN-DC-1 986 326 5.64 28.92 YN-DC-2 1 119 619 5.95 32.83 YN-DC-3 1 012 986 5.83 29.71 YN-DC-4 1 095 620 5.67 32.13 YN-DC-5 1 012 025 5.89 29.68