基于SLAF-seq的天竺桂群体遗传变异分析
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杨颖, 刘向东, 段豪, 芦治国
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Genetic variation analysis of Cinnamomum japonicum populations based on SLAF-Seq technique
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YANG Ying, LIU Xiangdong, DUAN Hao, LU Zhiguo
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表1 30个样品的SNP信息统计
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Table 1 SNP information statistics of 30 samples
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样品编号 sample ID | SNP个数 SNP number | SNP 杂合率/% hetloci ratio | SNP 完整度/% integrity ratio | ZJ-LHZ-1 | 1 103 214 | 6.74 | 32.35 | ZJ-LHZ-2 | 1 042 601 | 6.34 | 30.58 | ZJ-LHZ-3 | 1 114 298 | 6.95 | 32.68 | ZJ-LHZ-4 | 1 138 102 | 7.16 | 33.38 | ZJ-LHZ-5 | 1 116 854 | 7.08 | 32.75 | ZJ-LHZ-6 | 944 920 | 5.68 | 27.71 | ZJ-TMS-3 | 1 320 574 | 7.48 | 38.73 | ZJ-TMS-4 | 1 373 270 | 7.66 | 40.27 | ZJ-TMS-5 | 1 211 864 | 8.43 | 35.54 | AH-JX-1 | 1 368 810 | 8.17 | 40.14 | AH-JX-2 | 917 896 | 6.25 | 26.92 | AH-JX-3 | 1 004 978 | 6.44 | 29.47 | AH-HS-1 | 1 352 623 | 8.98 | 39.67 | AH-HS-2 | 1 259 826 | 8.52 | 36.95 | AH-HS-3 | 1 386 854 | 8.30 | 40.67 | AH-HS-4 | 1 367 363 | 9.07 | 40.10 | AH-HS-5 | 1 345 653 | 8.91 | 39.46 | HN-FNS-1 | 1 249 145 | 8.12 | 36.63 | HN-FNS-2 | 1 337 990 | 8.44 | 39.24 | HN-FNS-3 | 1 229 537 | 8.72 | 36.06 | CQ-WZ-1 | 1 062 854 | 5.80 | 31.17 | CQ-WZ-2 | 1 013 706 | 6.20 | 29.73 | CQ-WZ-3 | 1 089 181 | 5.78 | 31.94 | CQ-WZ-4 | 1 022 760 | 5.61 | 29.99 | CQ-WZ-5 | 987 065 | 5.81 | 28.95 | YN-DC-1 | 986 326 | 5.64 | 28.92 | YN-DC-2 | 1 119 619 | 5.95 | 32.83 | YN-DC-3 | 1 012 986 | 5.83 | 29.71 | YN-DC-4 | 1 095 620 | 5.67 | 32.13 | YN-DC-5 | 1 012 025 | 5.89 | 29.68 |
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