ptr-MIR156a启动子克隆及特征分析

陈英,王浩然,许庆,黄敏仁*

南京林业大学学报(自然科学版) ›› 2011, Vol. 35 ›› Issue (06) : 1-5.

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南京林业大学学报(自然科学版) ›› 2011, Vol. 35 ›› Issue (06) : 1-5. DOI: 10.3969/j.jssn.1000-2006.2011.06.001
研究论文

ptr-MIR156a启动子克隆及特征分析

  • 陈英,王浩然,许庆,黄敏仁*
作者信息 +

Clone and characterization of ptr-MIR156a promoter in Populus trichocarpa

  • CHEN Ying,WANG Haoran,XU Qing,HUANG Minren*
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文章历史 +

摘要

miR156a在火炬松、烟草、拟南芥中的表达与病原菌侵染密切相关。为了研究miR156a在杨树与病原菌互作过程中分子机制,以毛果杨全基因组DNA为材料,预测ptr-MIR156a启动子的大概区域,设计特异性PCR引物,克隆了ptr-MIR156a上游启动子区500、1 000和1 500 bp片段,并进行顺式作用元件分析,然后分别构建了绿色荧光蛋白(GFP)报告基因植物表达载体,最后通过原生质体的瞬时表达体系对其进行了活性检测。结果表明,1 500 bp片段活性最高,1 000 bp片段次之,500 bp片段活性最低。

Abstract

MicroRNAs (miRNAs) are endogenous small RNAs that have large regulatory effects development and stress responses in plants. Recently studies show that the expression of miR156a is intensively related with pathogens infection in Loblolly pine, tobacco, Arabidopsis and maize. To understand the interaction mechanism between miR156a and poplar, we predicted ptr-MIR156a promoter region and amplified three upstreaming fragments of ptr-MIR156a from Populus trichocarpa, 500 bp, 1 000 bp, and 1 500 bp, respectively,analyzed their cisacting elements, then cloned them into plant expression vectors, pMDC83 and transferred into poplar protoplasts. Fluorescence results showed that they drove GFP gene expression at different levels. Based on this result, we could transfer theses fragments into plants and study ptr-miR156a expression patterns and regulation mechanism in the future.

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导出引用
陈英,王浩然,许庆,黄敏仁*. ptr-MIR156a启动子克隆及特征分析[J]. 南京林业大学学报(自然科学版). 2011, 35(06): 1-5 https://doi.org/10.3969/j.jssn.1000-2006.2011.06.001
CHEN Ying,WANG Haoran,XU Qing,HUANG Minren*. Clone and characterization of ptr-MIR156a promoter in Populus trichocarpa[J]. JOURNAL OF NANJING FORESTRY UNIVERSITY. 2011, 35(06): 1-5 https://doi.org/10.3969/j.jssn.1000-2006.2011.06.001
中图分类号: S722   

参考文献

[1]Lee R C, Feinbaum R L, Ambros V. The C.elegans heterochronic gene lin4 encodes small RNAs with antisense complementarity to lin14[J]. Cell, 1993, 75(5):843-854.
[2]Bartel D P. MicroRNAs: target recognition and regulatory functions[J]. Cell, 2009, 136(23): 215-233.
[3]Bracht J, Hunter S, Eachus R, et al. Transsplicing and polyadenylation of let7 microRNA primary transcripts[J]. RNA, 2004, 10(10): 1586-1594.
[4]Cai X, Hagedorn C H, Cullen B R. Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs[J]. RNA,2004, 10(12): 1957-1966.
[5]Lee Y, Kim M, Han J, et al. MicroRNA genes are transcribed by RNA polymeraseⅡ[J]. EMBO J, 2004, 23(20): 4051-4060.
[6]Lu S F, Sun Y H, Amerson H, et al. MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development[J]. Plant Journal,2007,51(6):1077-1098.
[7]Bazzini A A, Hopp H E, Beachy R N, et al. Infection and coaccumulation of tobacco mosaic virus proteins alter microRNA levels, correlating with symptom and plant development[J]. PNAS, 2007, 104(29):12157-12162.
[8]Tagami Y, Inaba N, Kutsuna N, et al. Specific enrichment of miRNAs in Arabidopsis thaliana infected with Tobacco mosaic virus[J]. DNA Research, 2007, 14(5):227-233.
[9]Chen J, Li W X, Xie D X, et al. Viral virulence protein suppresses RNA silencingmediated defense but upregulates the role of microRNA in host gene expression[J]. Plant Cell, 2004, 16(5):1302-1313.
[10]Yoo S D, Cho Y H, Sheen J. Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis[J]. Nature Protocols, 2007, 2(7): 1565-1572.
[11]Zhou X F,Ruan J H,Wang G D, et al. Characterization and identification of microRNA core promoters in four model species[J]. PLoS Computational Biology, 2007, 3(3):412-423.
[12]Jansson S,Douglas C J.Populus: a model system for plant biology[J].Annu Rev Plant Biol,2007,58: 435-458.
[13]DiazDeLeon F, Klotz L K, Lagrimini L M. Nucleotide sequence of the tobacco (Nicotiana tabacum) anionic peroxidase gene[J]. Plant Physiol,1993, 101(3):1117-1118.
[14]Daraselia N D,Tarchevskaya S,Narita J O. The promoter for tomato 3hydroxy3methylglutaryl coenzyme A reductase gene 2 has unusual regulatory elements that direct highlevel expression[J]. Plant Physiol,1996,112:727-733.
[15]Van der Molen G E, Labavitch J M, Strand L L, et al. Pathogeninduced vascular gels: Ethylene as a host intermediate[J]. Physiol Plant, 1983, 59(4): 573-580.
[16]翁宇,戴小枫. 农作物乙烯合成和信号转导途径及其对抗病反应的调控[J]. 分子植物育种, 2008, 6 (4):739-748.
[17]陈英, 黄敏仁, 诸葛强, 等. 植物抗病信号传导途径及其相互作用[J]. 南京林业大学学报:自然科学版, 2002, 26(3): 85-90.
[18] Hennig J, Dewey R E, Cutt J R, et al. Pathogen,salicylic acid and developmental dependent expression of a β1,3glucanase/GUS gene fusion in transgenic tobacco plants[J]. The Plant Journal, 1993,4(3):481-493.

基金

收稿日期:2011-07-19修回日期:2011-09-19基金项目:国家林业局林业公益性行业科研专项项目(200904048)作者简介:陈英(1973—),副教授。*黄敏仁(通信作者),教授。Email: njmrhuang@njfu.cn。

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